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865 266-3451
About
Professor, Helen Adams & the Arkansas Research Alliance Chair in Biomedical Informatics
UAMS College of Medicine
Biomedical Informatics
UAMS, Little Rock
I've published more than 300 articles. A full list of my publications can be found here: https://scholar.google.com/citations?user=aws0djcAAAAJ&hl=en
Publications for the years 2020 to 2021
- Jenjaroenpun P, Wanchai V, Ono-Moore KD, Laudadio J, James LP, Adams SH, Prior F, Nookaew I, Ussery DW, Wongsurawat T, Two SARS-CoV-2 Genome Sequences of Isolates from Rural U.S. Patients Harboring the D614G Mutation, Obtained Using Nanopore Sequencing, Microbiol Resour Announc. 2020 Dec 17;10(1):e01109-20. https://doi.org/10.1128/MRA.01109-20. PMID: 33334896
- Abram K, Udaondo Z, Bleker C, Wanchai V, Wassenaar TM, Robeson MS 2nd, Ussery DW, Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups, Commun Biol. 2021 Jan 26;4(1):117. https://doi.org/10.1038/s42003-020-01626-5. PMID: 33500552
- Jenjaroenpun P, Wongsurawat T, Wadley TD, Wassenaar TM, Liu J, Dai Q, Wanchai V, Akel NS, Jamshidi-Parsian A, Franco AT, Boysen G, Jennings ML, Ussery DW, He C, Nookaew I, Decoding the epitranscriptional landscape from native RNA sequences, Nucleic Acids Res. 2021 Jan 25;49(2):e7. https://doi.org/10.1093/nar/gkaa620. PMID: 32710622
- B Gautam, G Gyanwali, DW Ussery, Assessment of Bacterial Load in Polyethylene Terephthalate (PET) Bottled Water Marketed in Kathmandu Valley, Nepal, International Journal of Polymer Science, Volume 2021 |Article ID 6681249 | https://doi.org/10.1155/2021/6681249
- Wanchai V, Nookaew I, Ussery DW, ProdMX: Rapid query and analysis of protein functional domain based on compressed sparse matrices, Comput Struct Biotechnol J. 2020 Nov 24;18:3890-3896. https://doi.org/10.1016/j.csbj.2020.10.023. eCollection 2020. PMID: 33335686
- Patel L, Shukla T, Huang X, Ussery DW, Wang S, Machine Learning Methods in Drug Discovery, Molecules. 2020 Nov 12;25(22):5277. https://doi.org/10.3390/molecules25225277. PMID: 33198233
- Wongsurawat T, Jenjaroenpun P, De Loose A, Alkam D, Ussery DW, Nookaew I, Leung YK, Ho SM, Day JD, Rodriguez A, A novel Cas9-targeted long-read assay for simultaneous detection of IDH1/2 mutations and clinically relevant MGMT methylation in fresh biopsies of diffuse glioma, Acta Neuropathol Commun. 2020 Jun 20;8(1):87. https://doi.org/10.1186/s40478-020-00963-0. PMID: 32563269
- Udaondo Z, Jenjaroenpun P, Wongsurawat T, Meyers E, Anderson C, Lopez J, Mohan M, Tytarenko R, Walker B, Ussery D, Kothari A, Jun SR, Two Cases of Vancomycin-Resistant Enterococcus faecium Bacteremia With Development of Daptomycin-Resistant Phenotype and its Detection Using Oxford Nanopore Sequencing, Open Forum Infect Dis. 2020 May 23;7(6):ofaa180. https://doi.org/10.1093/ofid/ofaa180. eCollection 2020 Jun. PMID: 32550237
- Kandel S, Sripiboon S, Jenjaroenpun P, Ussery DW, Nookaew I, Robeson MS 2nd, Wongsurawat T, 16S rRNA Gene Amplicon Profiling of Baby and Adult Captive Elephants in Thailand, Microbiol Resour Announc. 2020 Jun 11;9(24):e00248-20. https://doi.org/10.1128/MRA.00248-20. PMID: 32527771
- Cleveland MH, Anekella B, Brewer M, Chin PJ, Couch H, Delwart E, Huggett J, Jackson S, Martin J, Monpoeho S, Morrison T, Ng SHS, Ussery D, Khan AS, Report of the 2019 NIST-FDA workshop on standards for next generation sequencing detection of viral adventitious agents in biologics and biomanufacturing, Biologicals. 2020 Mar;64:76-82. https://doi.org/10.1016/j.biologicals.2020.02.003. Epub 2020 Feb 22. PMID: 32094072
- Jenjaroenpun P, Wongsurawat T, Udaondo Z, Anderson C, Lopez J, Mohan M, Tytarenko R, Walker B, Nookaew I, Ussery D, Kothari A, Jun SR, Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia, Microbiol Resour Announc. 2020 Feb 6;9(6):e01380-19. https://doi.org/10.1128/MRA.01380-19. PMID: 32029568
- Wassenaar TM, Jun SR, Robeson M, Ussery DW, Comparative genomics of hepatitis A virus, hepatitis C virus, and hepatitis E virus provides insights into the evolutionary history of Hepatovirus species, Microbiologyopen. 2020 Feb;9(2):e973. https://doi.org/10.1002/mbo3.973. Epub 2019 Nov 19. PMID: 31742930